Home Projects Downloads DOCUMENTATION Events About
 Spectrum Translator  Workflow Builder

Spectrum Translator Assumptions

Spectrum Translator Configuration

Spectrum Translator Quickstart


The Connjur Spectrum Translator (ST) can be run from the command line with a minimum of four arguments. For example, to convert from a Varian spectrum in the directory nhsqc5 to a NMRPipe formatted file named nhsqc.pip, utilize the following command:

ConnjurST --srctype varian --srcdir nhsqc5 --desttype nmrpipe --destfile nhsqc.pip

Basic arguments

The basic arguments are:

Additional examples

Converting from Rowland Toolkit to Bruker, use the shorter form of the arguments

ConnjurST -st rowland -sf myprotein.sec -dt bruker -dd prot_bruker
The arguments may be given in any order.
ConnjurST -st rowland -dt bruker -sf myprotein.sec -dd prot_bruker
is the same command as above.